GenomePaint Allele-specific expression (ASE) Example - beta

St. Jude Cloud

St. Jude Cloud

Sep 28, 2021

1.9K

The allele-specific expression (ASE) track annotates the tumor gene expression. Scroll through the color coded FPKM values on the right to reveal the ASE status: mono-allelic, bi-allelic, uncertain, or no information available. Clicking on the DNA markers represented as 'x's, generates a pop-up of the marker details, sample view in the genome brower, and a diverging stacked bar chart of the transcript factor motif.

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