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HTAPP-130-SMP-91
Dyer Lab
Dyer Lab
60
2
Mar 10, 2022
PMID 99999999
< 1k
Sample name: HTAPP-130-SMP-91
Processing method: single-nucleus RNA-seq (frozen tissue)
Biopsy or resection: resection
Age: 2 yr
Sample site (anatomic site of tissue resection): Adrenal Gland, Right
Primary site: Adrenal
Histologic diagnosis Neuroblastoma
INSS Stage: 4
INRGSS Stage: M
COG risk stratum: High
MYCN status: amplified
ALK mutation status: mutant, L1196M
Treatment status: untreated
Methylation group: 4
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runproteinpaint({ holder:visualizationContainer[0], genome:'hg38', noheader:1, singlecell:{ genome:'hg38', jsonfile:'apatel2/HTAPP_NB_visualizer/HTAPP-130-SMP-91/HTAPP-130-SMP-91.json', legendimg: { name: 'HTAPP-130-SMP-91 CNV png title', file: 'apatel2/HTAPP_NB_visualizer/HTAPP-130-SMP-91/HTAPP-130-SMP-91_infercnv.png', height: 800 }, } })
Visualization Code
runproteinpaint({ holder:visualizationContainer[0], genome:'hg38', noheader:1, singlecell:{ genome:'hg38', jsonfile:'apatel2/HTAPP_NB_visualizer/HTAPP-130-SMP-91/HTAPP-130-SMP-91.json', legendimg: { name: 'HTAPP-130-SMP-91 CNV png title', file: 'apatel2/HTAPP_NB_visualizer/HTAPP-130-SMP-91/HTAPP-130-SMP-91_infercnv.png', height: 800 }, } })