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HTAPP-146-SMP-131
Dyer Lab
Dyer Lab
60
2
Mar 10, 2022
PMID 9999999999
< 1k
Sample name: HTAPP-146-SMP-131
Processing method: single-nucleus RNA-seq (frozen tissue)
Biopsy or resection: resection
Age: 2 yr
Sample site (anatomic site of tissue resection): Mass, Paraspinal
Primary site: Paraspinal Mass
Histologic diagnosis Neuroblastoma
INSS Stage: 2A
INRGSS Stage: L1
COG risk stratum: Low
MYCN status: non-amplified
ALK mutation status: wild type
Treatment status: untreated
Methylation group: 1
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runproteinpaint({ holder:visualizationContainer[0], genome:'hg38', noheader:1, singlecell:{ genome:'hg38', jsonfile:'apatel2/HTAPP_NB_visualizer/HTAPP-146-SMP-131/HTAPP-146-SMP-131.json', legendimg: { name: 'HTAPP-146-SMP-131 CNV png title', file: 'apatel2/HTAPP_NB_visualizer/HTAPP-146-SMP-131/HTAPP-146-SMP-131_infercnv.png', height: 800 }, } })
Visualization Code
runproteinpaint({ holder:visualizationContainer[0], genome:'hg38', noheader:1, singlecell:{ genome:'hg38', jsonfile:'apatel2/HTAPP_NB_visualizer/HTAPP-146-SMP-131/HTAPP-146-SMP-131.json', legendimg: { name: 'HTAPP-146-SMP-131 CNV png title', file: 'apatel2/HTAPP_NB_visualizer/HTAPP-146-SMP-131/HTAPP-146-SMP-131_infercnv.png', height: 800 }, } })