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HTAPP-163-SMP-181
Dyer Lab
Dyer Lab
60
2
Mar 10, 2022
PMID 99999999
< 1k
Sample name: HTAPP-163-SMP-181
Processing method: single-cell RNA-seq (fresh tissue)
Biopsy or resection: resection
Age: 22 mo
Sample site (anatomic site of tissue resection): Retroperitoneal mass
Primary site: Adrenal
Histologic diagnosis Neuroblastoma
INSS Stage: 4
INRGSS Stage: M
COG risk stratum: High
MYCN status: non-amplified
ALK mutation status: wild type
Treatment status: chemotherapy
Methylation group: 2
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runproteinpaint({ holder:visualizationContainer[0], genome:'hg38', noheader:1, singlecell:{ genome:'hg38', jsonfile:'apatel2/HTAPP_NB_visualizer/HTAPP-163-SMP-181/HTAPP-163-SMP-181.json', legendimg: { name: 'HTAPP-163-SMP-181 CNV png title', file: 'apatel2/HTAPP_NB_visualizer/HTAPP-163-SMP-181/HTAPP-163-SMP-181_infercnv.png', height: 800 }, } })
Visualization Code
runproteinpaint({ holder:visualizationContainer[0], genome:'hg38', noheader:1, singlecell:{ genome:'hg38', jsonfile:'apatel2/HTAPP_NB_visualizer/HTAPP-163-SMP-181/HTAPP-163-SMP-181.json', legendimg: { name: 'HTAPP-163-SMP-181 CNV png title', file: 'apatel2/HTAPP_NB_visualizer/HTAPP-163-SMP-181/HTAPP-163-SMP-181_infercnv.png', height: 800 }, } })