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HTAPP-800-SMP-6783
Dyer Lab
Dyer Lab
60
2
Mar 10, 2022
PMID 99999999
< 1k
Sample name: HTAPP-800-SMP-6783
Processing method: single-nucleus RNA-seq (frozen tissue)
Biopsy or resection: resection
Age: 8 mo
Sample site (anatomic site of tissue resection): Paraspinal Mass
Primary site: Paraspinal Mass
Histologic diagnosis Neuroblastoma
INSS Stage: 2B
INRGSS Stage: unknown
COG risk stratum: Low
MYCN status: non-amplified
ALK mutation status: unknown
Treatment status: unknown
Methylation group: unknown
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runproteinpaint({ holder:visualizationContainer[0], genome:'hg38', noheader:1, singlecell:{ genome:'hg38', jsonfile:'apatel2/HTAPP_NB_visualizer/HTAPP-800-SMP-6783/HTAPP-800-SMP-6783.json', legendimg: { name: 'HTAPP-800-SMP-6783 CNV png title', file: 'apatel2/HTAPP_NB_visualizer/HTAPP-800-SMP-6783/HTAPP-800-SMP-6783_infercnv.png', height: 800 }, } })
Visualization Code
runproteinpaint({ holder:visualizationContainer[0], genome:'hg38', noheader:1, singlecell:{ genome:'hg38', jsonfile:'apatel2/HTAPP_NB_visualizer/HTAPP-800-SMP-6783/HTAPP-800-SMP-6783.json', legendimg: { name: 'HTAPP-800-SMP-6783 CNV png title', file: 'apatel2/HTAPP_NB_visualizer/HTAPP-800-SMP-6783/HTAPP-800-SMP-6783_infercnv.png', height: 800 }, } })