Genome browser for AD proteogenomics
Here we demonstrate NetAD data integrated with GenomePaint. Tracks from various Alzheimer's Disease (AD) and reference tracks are displayed, showing the peptide sequence. To navigate to a gene of your choice enter the gene name or chromosomal coordinates in the upper left of the visualization. Currently MAPT, the AD relevant Tau protein, on chr17, which contains a mutation, is shown by default. Peptides from the 6 FT search set and those with novel junctions were not observed in this genomic interval. To see data for all sets simultaneously enter this interval into the navigation box: Chr17:0-81195210. The visualization allows zooming in and out through button controls. Alternatively chromosome locations may be added directly to the navigation box.