GenomePaint Allele-specific expression (ASE) Example - beta

Zhou Lab

Zhou Lab

Sep 28, 2021


The allele-specific expression (ASE) track annotates the tumor gene expression. Scroll through the color coded FPKM values on the right to reveal the ASE status: mono-allelic, bi-allelic, uncertain, or no information available. Clicking on the DNA markers represented as 'x's, generates a pop-up of the marker details, sample view in the genome brower, and a diverging stacked bar chart of the transcript factor motif.

Learn more about the ASE track

Read more
Loading Visualization
Visualization Code