Visualization Community | St. Jude Cloud

GenomePaint Track List and Facet Table Example

Zhou Lab

Sep 28, 2021

5.1K

Click on the 'Tracks' button, second to the right, in the visualization header. Click on the button under 'FACET' to open a popup window to see tracks arranged by sample vs. assay. Tracks can be shown in groups by clicking on the row or column links as well as individually by clicking on a cell. Learn more about the Track List and Facet Table track.

Loading Visualization

runproteinpaint({
  	"host": "https://proteinpaint.stjude.org/",
  	"holder": document.getElementById('visualization_container'),
	"block": 1,
	"nobox": 1,
	"noheader": 1,
 	"genome": "hg19",
	"nativetracks":"refgene",
 	"tkjsonfile": "proteinpaint_demo/hg19/tklist/tracks.json"
})

Visualization Code

runproteinpaint({
  	"host": "https://proteinpaint.stjude.org/",
  	"holder": document.getElementById('visualization_container'),
	"block": 1,
	"nobox": 1,
	"noheader": 1,
 	"genome": "hg19",
	"nativetracks":"refgene",
 	"tkjsonfile": "proteinpaint_demo/hg19/tklist/tracks.json"
})

GenomePaint Track List and Facet Table Example

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Loading Visualization

Visualization Code