NetAD
NetAD: Network modeling of bulk and single-cell multi-omics data to identify drivers for Alzheimer's Disease.
To increase our understanding of Alzheimer's disease (AD) by using network-based systems biology tools to harmonize cross-studied multi-omics data at the bulk and single-cell levels, thereby providing new therapeutic targets and biomarkers towards AD prevention and treatment.
Deep Multilayer Brain Proteomics Identifies Molecular Networks in Alzheimer's Disease Progression
Bing Bai, Xusheng Wang, Yuxin Li, Ping-Chung Chen, Kaiwen Yu, Kaushik Kumar Dey, Jay M Yarbro, Xian Han, Brianna M Lutz, Shuquan Rao, Yun Jiao, Jeffrey M Sifford, Jonghee Ha, Minghui Wang, Haiyan Tan, Timothy I Shaw, Ji-Hoon Cho, Suiping Zhou, Hong Wang, Mingming Niu, Ariana Mancieri, Kaitlynn A Messler, Xiaojun Sun, Zhiping Wu, Vishwajeeth Pagala, Anthony A High, Wenjian Bi, Hui Zhang, Hongbo Chi, Vahram Haroutunian, Bin Zhang, Thomas G Beach, Gang Yu, Junmin Peng
Integrative Proteomics and Phosphoproteomics Profiling Reveals Dynamic Signaling Networks and Bioenergetics Pathways Underlying T Cell Activation
Haiyan Tan , Kai Yang , Yuxin Li , Timothy I Shaw , Yanyan Wang , Daniel Bastardo Blanco , Xusheng Wang , Ji-Hoon Cho , Hong Wang , Sherri Rankin , Cliff Guy , Junmin Peng , Hongbo Chi
JUMPg: An Integrative Proteogenomics Pipeline Identifying Unannotated Proteins in Human Brain and Cancer Cells
Yuxin Li, Xusheng Wang, Ji-Hoon Cho, Timothy I Shaw, Zhiping Wu, Bing Bai, Hong Wang 1, Suiping Zhou, Thomas G Beach 2, Gang Wu, Jinghui Zhang, Junmin Peng